Bioinformatic methods applied to the analysis of the genes retained after the whole genome duplication events in the sterlet genome (Acipenser ruthenus)

Mikhail Fofanov, Tatyana Sheglova, Vladimir Trifonov, Manfred Schartl

Research output: Chapter in Book/Report/Conference proceedingConference contributionResearchpeer-review

Abstract

Duplications are the powerful mechanism underlying the origin of new genes. In this study we describe several duplicated genes retained after the whole genome duplication in the genome of recently sequenced and assembled sterlet (Acipenser ruthenus). We demonstrate that genes encoding heat shock proteins and transcription factors participating in intercellular communication and sex determination are mostly retained after genome doubling.

Original languageEnglish
Title of host publicationProceedings - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages53-56
Number of pages4
ISBN (Electronic)9781728195971
DOIs
Publication statusPublished - Jul 2020
Event2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020 - Novosibirsk, Russian Federation
Duration: 6 Jul 202010 Jul 2020

Publication series

NameProceedings - 2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020

Conference

Conference2020 Cognitive Sciences, Genomics and Bioinformatics, CSGB 2020
CountryRussian Federation
CityNovosibirsk
Period06.07.202010.07.2020

Keywords

  • genome evolution
  • paralogs
  • polyploidy
  • sturgeon
  • WGD

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